STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0780Hypothetical protein; Containing ferredoxin region (COG1146). (245 aa)    
Predicted Functional Partners:
hcp
6Fe-6S prismane cluster-containing protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
     0.825
Crp
cAMP-binding proteins; Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
 
     0.799
MmcM
Related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
     
 0.460
PTH_2234
Uncharacterized conserved protein; Containing a ferredoxin-like domain.
    
   0.457
TagG
ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
     0.456
PTH_0027
Hypothetical protein.
 
 
 
 0.440
PTH_0782
Hypothetical protein.
       0.409
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.