Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTH_0780Hypothetical protein; Containing ferredoxin region (COG1146). (245 aa)    
Predicted Functional Partners:
hcp
6Fe-6S prismane cluster-containing protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
   
 0.825
Crp
cAMP-binding proteins; Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
 
     0.798
MmcM
Related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
     
 0.464
TagG
ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
     0.456
PTH_0782
Hypothetical protein.
       0.409
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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