STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NlpDMembrane protein; Related to metalloendopeptidases. (247 aa)    
Predicted Functional Partners:
FliY
Flagellum motor switch protein.
   
   0.687
SpoIVFB
Zn-dependent protease.
       0.683
FtsW
Bacterial cell division membrane protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
   
 0.644
MrcB
Membrane carboxypeptidase; Penicillin-binding protein.
  
   
 0.614
MrcB-2
Membrane carboxypeptidase; Penicillin-binding protein.
  
   
 0.597
FtsI-2
Cell division protein; FtsI/penicillin-binding protein 2.
  
   
 0.576
MinE
Septum formation topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
  
    0.568
PTH_0827
Fe-S oxidoreductase.
  
    0.513
CafA
Ribonucleases G and E.
  
  
 0.503
PTH_0828
Uncharacterized protein conserved in bacteria.
       0.491
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.