Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SpoIVFBZn-dependent protease. (292 aa)    
Predicted Functional Partners:
NlpD
Membrane protein; Related to metalloendopeptidases.
       0.663
PTH_0054
Hypothetical membrane protein.
  
  
 0.619
CafA
Ribonucleases G and E.
       0.582
PTH_0828
Uncharacterized protein conserved in bacteria.
       0.581
PTH_0827
Fe-S oxidoreductase.
       0.580
PTH_2800
Hypothetical protein.
   
  
 0.499
MinE
Septum formation topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
       0.474
PTH_2907
Uncharacterized membrane protein.
  
    0.473
SpoIIM
Uncharacterized membrane protein.
  
  
 0.468
MinD-3
Septum formation inhibitor-activating ATPase.
       0.463
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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