STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0832Hypothetical protein. (190 aa)    
Predicted Functional Partners:
CitB-2
Response regulator; Citrate/malate metabolism.
 
 
 0.775
PTH_1969
Hypothetical membrane protein.
  
     0.604
PspA
Suppresse phage shock protein A; (IM30), sigma54-dependent transcription.
  
     0.597
Obg
Predicted GTPase; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
       0.585
PTH_2859
Hypothetical protein.
  
     0.567
PTH_0770
Hypothetical membrane protein.
  
    0.555
RpmA
Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
       0.531
FeoA
Fe2+ transport system protein A.
  
     0.511
PTH_1957
Hypothetical protein.
  
     0.481
PTH_0772
Hypothetical membrane protein.
  
     0.474
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.