STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0854Hypothetical membrane protein; Containing DNA uptake protein and related DNA-binding protein region (ComEA, COG1555). (208 aa)    
Predicted Functional Partners:
ComEC-2
Predicted hydrolase; Metallo-beta-lactamase superfamily, containing predicted metal-binding region.
 
  
 0.879
PulO
Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
   
  
 0.700
PulF
Type II secretory pathway, component PulF.
  
  
 0.677
PulF-2
Type II secretory pathway, component PulF.
  
  
 0.677
Ssb
Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
 
  
 0.665
PulE
Type II secretory pathway, ATPase PulE/tfp pilus assembly pathway, ATPase PilB.
  
  
 0.656
PulE-2
Type II secretory pathway, ATPase PulE/tfp pilus assembly pathway, ATPase PilB.
  
  
 0.656
ComFC
Predicted amidophosphoribosyltransferases.
 
  
 0.607
PTH_0856
Hypothetical protein; Containing partial COG3953, SLT domain proteins.
     
 0.536
PTH_1156
Hypothetical protein; Containing PulG (COG2165), type II secretory pathway, pseudopilin PulG and COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor.
  
  
 0.531
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.