Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AmiC | MurI | PTH_0361 | PTH_0787 | N-acetylmuramoyl-L-alanine amidase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.754 |
| AmiC | MurI-2 | PTH_0361 | PTH_0922 | N-acetylmuramoyl-L-alanine amidase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.754 |
| AmiC-2 | MurI | PTH_0438 | PTH_0787 | N-acetylmuramoyl-L-alanine amidase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.759 |
| AmiC-2 | MurI-2 | PTH_0438 | PTH_0922 | N-acetylmuramoyl-L-alanine amidase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.759 |
| AmiC-3 | MurI | PTH_1425 | PTH_0787 | N-acetylmuramoyl-L-alanine amidase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.754 |
| AmiC-3 | MurI-2 | PTH_1425 | PTH_0922 | N-acetylmuramoyl-L-alanine amidase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.754 |
| AmiC-4 | MurI | PTH_1971 | PTH_0787 | N-acetylmuramoyl-L-alanine amidase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.754 |
| AmiC-4 | MurI-2 | PTH_1971 | PTH_0922 | N-acetylmuramoyl-L-alanine amidase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.754 |
| AmiC-5 | MurI | PTH_2007 | PTH_0787 | N-acetylmuramoyl-L-alanine amidase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.754 |
| AmiC-5 | MurI-2 | PTH_2007 | PTH_0922 | N-acetylmuramoyl-L-alanine amidase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.754 |
| FtsK | MurI-2 | PTH_1293 | PTH_0922 | DNA segregation ATPase FtsK/SpoIIIE and related proteins. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.542 |
| GltB-2 | MurD | PTH_0734 | PTH_1863 | Glutamate synthase domain 2. | UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.597 |
| GltB-2 | MurI | PTH_0734 | PTH_0787 | Glutamate synthase domain 2. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.568 |
| GltB-2 | MurI-2 | PTH_0734 | PTH_0922 | Glutamate synthase domain 2. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.568 |
| GltB-2 | PurL-2 | PTH_0734 | PTH_1430 | Glutamate synthase domain 2. | Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with [...] | 0.900 |
| MurD | GltB-2 | PTH_1863 | PTH_0734 | UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | Glutamate synthase domain 2. | 0.597 |
| MurD | MurI | PTH_1863 | PTH_0787 | UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.973 |
| MurD | MurI-2 | PTH_1863 | PTH_0922 | UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.971 |
| MurD | PurL-2 | PTH_1863 | PTH_1430 | UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with [...] | 0.900 |
| MurI | AmiC | PTH_0787 | PTH_0361 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | N-acetylmuramoyl-L-alanine amidase. | 0.754 |
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