STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0943Hypothetical membrane protein. (164 aa)    
Predicted Functional Partners:
CorA
Mg2+ and Co2+ transporters; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
  
    0.733
Bfr
Bacterioferritin; Cytochrome b1.
   
  
 0.642
SpoIIAA-2
Anti-anti-sigma regulatory factor; Antagonist of anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
   
  
 0.586
PTH_2276
Hypothetical protein; Containing SpoIIAA (COG1366), anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
   
  
 0.586
PTH_0084
Hypothetical protein.
  
    0.542
PTH_0944
Uncharacterized conserved protein.
       0.505
PTH_1227
Uncharacterized conserved protein.
  
    0.501
PTH_1616
Hypothetical membrane protein.
  
     0.486
PTH_1615
Hypothetical membrane protein.
  
     0.478
SpeE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
       0.460
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.