STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
CbiMABC-type Co2+ transport system, permease component; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (236 aa)    
Predicted Functional Partners:
CbiQ-2
ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 
 0.983
CbiQ-4
ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 
 0.979
cbiD
Cobalamin biosynthesis protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
 
 0.978
CbiO-5
ABC-type cobalt transport system, ATPase component; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 0.960
CbiM-2
ABC-type Co2+ transport system, permease component.
  
  
 
0.926
PTH_1958
Hypothetical protein.
 
  
  0.925
CobH
Precorrin isomerase; Containing CbiX domain.
 
  
 0.855
PTH_0956
precorrin-3B methylase and precorrin-6x reductase; COG1010, CobJ and COG2099, CobK.
 
  
 0.852
CbiG
Cobalamin biosynthesis protein CbiG.
 
  
 0.842
PTH_0952
precorrin-6B methylase 1,2; Containing COG2241 and COG2242.
 
  
 0.835
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.