STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_0980Hypothetical protein. (105 aa)    
Predicted Functional Partners:
PTH_0982
Predicted GTPase.
 
    0.954
BioB-3
Biotin synthase and related enzymes.
 
    0.892
ThiH-4
Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes.
 
     0.885
AspA
Aspartate ammonia-lyase.
       0.803
BioB
Biotin synthase and related enzymes.
 
    0.757
PTH_0973
uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase; COG0007 CysG and COG1587 HemD.
     
 0.600
PTH_0028
Containing COG4624, iron only hydrogenase large subunit, C-terminal domain; COG2000, predicted Fe-S protein; and PAS domain.
 
     0.535
HemL
Glutamate-1-semialdehyde aminotransferase.
     
 0.488
PTH_2010
NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit, chain G.
 
     0.482
PTH_0952
precorrin-6B methylase 1,2; Containing COG2241 and COG2242.
  
  
 0.447
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.