STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1021Hypothetical protein. (218 aa)    
Predicted Functional Partners:
PTH_1241
Uncharacterized conserved protein.
  
   
 0.757
PTH_1847
peptidase_U4, Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
   
 0.749
PTH_2760
Uncharacterized conserved protein.
  
   
 0.743
PTH_1844
Uncharacterized conserved protein.
  
   
 0.729
PTH_1163
Hypothetical protein.
  
     0.714
PTH_0185
Hypothetical membrane protein.
  
     0.711
PTH_1612
Hypothetical membrane protein.
  
     0.711
PTH_1615
Hypothetical membrane protein.
  
     0.706
PTH_0889
Hypothetical membrane protein; Containing Yqf domain.
  
     0.703
PTH_0191
Hypothetical membrane protein; Containing PTC1 (COG0631), serine/threonine protein phosphatase.
  
     0.672
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.