STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1063Uncharacterized protein conserved in bacteria; Belongs to the UPF0297 family. (86 aa)    
Predicted Functional Partners:
PTH_1065
Predicted endonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
 
    0.958
Tas
Predicted oxidoreductases; Related to aryl-alcohol dehydrogenases.
       0.793
PTH_1725
Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
   
 0.764
PTH_2902
Uncharacterized protein conserved in bacteria.
  
     0.763
PTH_1802
Predicted RNA binding protein homologous to eukaryotic snRNP.
  
     0.748
PTH_0913
Predicted SAM-dependent methyltransferase.
  
     0.743
RfbX-2
Membrane protein; Involved in the export of O-antigen and teichoic acid.
  
     0.714
sepF
Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
    0.713
PTH_1066
Hypothetical protein; Belongs to the UPF0473 family.
  
  
 0.688
PTH_1267
Predicted nucleic acid-binding protein; Implicated in transcription termination.
  
   
 0.688
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.