Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
PTH_1069Collagenase and related proteases. (422 aa)    
Predicted Functional Partners:
mltG
Predicted periplasmic solute-binding protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
  
    0.850
FtsI-2
Cell division protein; FtsI/penicillin-binding protein 2.
       0.612
NapF
Ferredoxin.
  
   0.568
PTH_2647
Hypothetical membrane protein; Containing partial NuoG (COG1034), NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G).
   
   0.542
PTH_1067
Uncharacterized vancomycin resistance protein.
       0.504
PTH_1071
Hypothetical transcriptional regulator; Containing two HipB (COG1476) domains.
  
    0.459
PTH_1072
Predicted membrane protein.
       0.435
PTH_1066
Hypothetical protein; Belongs to the UPF0473 family.
       0.418
PTH_0881
Uncharacterized protein conserved in bacteria; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
   
    0.401
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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