STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1084Predicted glycosyltransferases. (343 aa)    
Predicted Functional Partners:
RibF
FAD synthase; Belongs to the ribF family.
 
 
    0.878
TagG-3
ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.851
WcaJ-2
Sugar transferases involved in lipopolysaccharide synthesis.
  
 0.834
PTH_1085
Hypothetical protein; Containing partial UbiE (COG2226), methylase involved in ubiquinone/menaquinone biosynthesis.
 
     0.800
TagH
ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.764
FliY
Flagellum motor switch protein.
    
   0.744
RfbD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 0.717
PTH_2772
Hypothetical protein; Containing glycosyl transferases group 1 domain.
 
  
 0.667
RfbD-2
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 0.638
RfbA-2
dTDP-glucose pyrophosphorylase.
 
  
 0.626
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.