Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
WcaG-2Nucleoside-diphosphate-sugar epimerases. (312 aa)    
Predicted Functional Partners:
GalE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
0.936
WcaG-4
Nucleoside-diphosphate-sugar epimerases.
 
0.934
GalU-2
UDP-glucose pyrophosphorylase.
 
 
 0.928
GalT
Galactose-1-phosphate uridylyltransferase.
   
 
 0.909
ManB-3
Phosphomannomutase.
  
 0.907
RpsS
Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.850
RpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
 0.842
RfbA
dTDP-glucose pyrophosphorylase.
  
 
 0.841
RfbA-2
dTDP-glucose pyrophosphorylase.
  
 
 0.841
RpsL
Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.
   
 0.834
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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