STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1102Hypothetical protein; Containing fibronectin type 3 domain. (680 aa)    
Predicted Functional Partners:
PTH_1099
Hypothetical protein; Containing partial COG3146, Uncharacterized protein conserved in bacteria.
 
   
 0.857
PblB
Phage-related protein.
 
 
   0.840
PTH_2177
RTX toxins and related Ca2+-binding proteins.
 
 
   0.831
PTH_2193
Hypothetical protein; Containing partial COG5410, Uncharacterized protein conserved in bacteria and partial COG5362, Phage-related terminase.
 
   
 0.785
PTH_2197
Hypothetical protein.
  
  
 0.780
DnaG-2
DNA primase; Bacterial type.
  
     0.774
DnaB
Replicative DNA helicase.
  
     0.772
DnaC-2
DNA replication protein.
  
     0.771
PTH_0622
Predicted archaeal sugar kinases.
  
     0.769
NrdD-2
Oxygen-sensitive ribonucleoside-triphosphate reductase.
  
     0.760
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.