Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTH_1105Hypothetical protein; Containing Wzy_C, O-Antigen Polymerase domain. (430 aa)    
Predicted Functional Partners:
WecB-2
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.793
RfaG-7
Glycosyltransferase.
  
  
 0.792
RfaG-8
Glycosyltransferase.
  
  
 0.792
RfaG-9
Glycosyltransferase.
  
  
 0.792
MviN
Uncharacterized membrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
  
  
 0.780
RfaG-10
Glycosyltransferase.
  
  
 0.777
WcaJ-2
Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.690
PTH_1120
Hypothetical protein; Containing two Glycos_transf_2, Glycosyl transferase domain, TPR, Tetratricopeptide repeat domain and partial COG1216, predicted glycosyltransferases.
  
  
 0.515
WcaJ
Sugar transferases; Involved in lipopolysaccharide synthesis.
  
  
 0.480
PTH_1102
Hypothetical protein; Containing fibronectin type 3 domain.
       0.456
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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