STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RfaG-9Glycosyltransferase. (402 aa)    
Predicted Functional Partners:
RfaG-8
Glycosyltransferase.
 
    
0.832
WecB-2
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.810
RfaG-7
Glycosyltransferase.
 
     0.803
PTH_1105
Hypothetical protein; Containing Wzy_C, O-Antigen Polymerase domain.
  
  
 0.792
RfaG-10
Glycosyltransferase.
 
     0.785
RfaG-5
Glycosyltransferase.
     0.782
MviN
Uncharacterized membrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
       0.763
PTH_2572
Containing COG0438, RfaG, glycosyltransferase.
 
     0.731
RfaG-4
Glycosyltransferase.
  
     0.640
WcaJ-2
Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.603
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.