STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LpxD3-hydroxymyristoyl. (272 aa)    
Predicted Functional Partners:
MviM-2
Predicted dehydrogenases and related proteins.
 
     0.938
WecE-2
Predicted pyridoxal phosphate-dependent enzyme; Involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
   0.881
AcpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.834
PTH_1112
Capsular polysaccharide biosynthesis protein.
       0.782
ribBA
GTP cyclohydrolase II and 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
 
 0.706
PTH_0380
Carbonic anhydrases/acetyltransferases; Isoleucine patch superfamily.
   
0.684
RfaG-10
Glycosyltransferase.
 
   
 0.664
WecE-3
Predicted pyridoxal phosphate-dependent enzyme; Involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
   0.654
WecC-2
UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.613
RfaG-7
Glycosyltransferase.
 
   
 0.608
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.