Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
WecE-2Predicted pyridoxal phosphate-dependent enzyme; Involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family. (366 aa)    
Predicted Functional Partners:
LpxD
3-hydroxymyristoyl.
   0.881
MviM-2
Predicted dehydrogenases and related proteins.
 
  
 0.829
WcaJ-2
Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.816
PTH_1075
Predicted nucleoside-diphosphate sugar epimerases.
 
  
 0.815
PTH_0380
Carbonic anhydrases/acetyltransferases; Isoleucine patch superfamily.
  
 0.767
MviM
Predicted dehydrogenases and related proteins.
 
  
 0.707
PTH_1112
Capsular polysaccharide biosynthesis protein.
  
    0.704
WecE-3
Predicted pyridoxal phosphate-dependent enzyme; Involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
 
    
0.582
WcaJ
Sugar transferases; Involved in lipopolysaccharide synthesis.
 
  
 0.534
WecC
UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.533
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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