STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WecE-3Predicted pyridoxal phosphate-dependent enzyme; Involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family. (370 aa)    
Predicted Functional Partners:
WecE
Predicted pyridoxal phosphate-dependent enzyme; Involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 
0.906
WcaJ-2
Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.833
PTH_1075
Predicted nucleoside-diphosphate sugar epimerases.
  
 0.806
MviM-2
Predicted dehydrogenases and related proteins.
 
  
 0.737
MviM
Predicted dehydrogenases and related proteins.
 
  
 0.694
LpxD
3-hydroxymyristoyl.
 
 0.659
PTH_1120
Hypothetical protein; Containing two Glycos_transf_2, Glycosyl transferase domain, TPR, Tetratricopeptide repeat domain and partial COG1216, predicted glycosyltransferases.
  
  
 0.610
RfbB
dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.590
WecE-2
Predicted pyridoxal phosphate-dependent enzyme; Involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
 
    
0.582
RfbB-2
dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.580
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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