Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PilMTfp pilus assembly protein, ATPase PilM. (302 aa)    
Predicted Functional Partners:
PilO
Tfp pilus assembly protein PilO.
  
 
 0.941
PTH_1142
Hypothetical membrane protein.
  
 
 0.940
PTH_1150
Hypothetical membrane protein.
  
 
 0.915
PilO-2
Tfp pilus assembly protein PilO.
 
 
 0.854
PulO
Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.841
PilT-2
Tfp pilus assembly protein, pilus retraction ATPase PilT.
 
   
 0.781
PilT
Tfp pilus assembly protein; Pilus retraction ATPase PilT.
 
   
 0.762
FimT
Tfp pilus assembly protein FimT.
 
  
 0.750
PulF
Type II secretory pathway, component PulF.
 
 
 
 0.723
PTH_1140
Hypothetical membrane protein.
     
 0.723
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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