STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PulE-2Type II secretory pathway, ATPase PulE/tfp pilus assembly pathway, ATPase PilB. (560 aa)    
Predicted Functional Partners:
PulF-2
Type II secretory pathway, component PulF.
 
 0.983
PulF
Type II secretory pathway, component PulF.
 
 0.966
PilM-2
Tfp pilus assembly protein, ATPase PilM.
 
 
 0.931
PulO
Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.918
PTH_1150
Hypothetical membrane protein.
  
 
 0.883
PilT-2
Tfp pilus assembly protein, pilus retraction ATPase PilT.
 
  
0.860
PTH_1142
Hypothetical membrane protein.
  
 
 0.797
FimT
Tfp pilus assembly protein FimT.
  
 
 0.787
PilO-2
Tfp pilus assembly protein PilO.
  
 
 0.761
PTH_1156
Hypothetical protein; Containing PulG (COG2165), type II secretory pathway, pseudopilin PulG and COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor.
  
 
 0.738
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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