STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1188Uncharacterized proteins, homologs of lactam utilization protein B; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (249 aa)    
Predicted Functional Partners:
PTH_1187
Hypothetical protein.
 
 0.998
DUR1
Allophanate hydrolase subunit 1.
 
  
 0.981
PutP-2
Na+/proline symporter.
  
 0.938
GlnA-3
Glutamine synthetase.
   
 
  0.804
GlnA-4
Glutamine synthetase.
   
 
  0.804
GlnA-5
Glutamine synthetase.
   
 
  0.804
GlnA-6
Glutamine synthetase.
   
 
  0.804
GdhA
Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
  0.800
GltB-2
Glutamate synthase domain 2.
     
  0.800
GltD-2
NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
     
  0.800
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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