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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SpoIIMUncharacterized membrane protein. (212 aa)    
Predicted Functional Partners:
PTH_1167
Hypothetical membrane protein.
  
  
 0.893
PTH_1170
Hypothetical membrane protein.
  
  
 0.857
PTH_1169
Hypothetical membrane protein.
  
  
 0.844
PTH_0888
Hypothetical protein; Containing DUF1429 domain.
  
   
 0.838
PTH_1847
peptidase_U4, Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
  
 0.810
PTH_0191
Hypothetical membrane protein; Containing PTC1 (COG0631), serine/threonine protein phosphatase.
  
   
 0.794
PTH_1202
Predicted membrane-associated Zn-dependent protease 1.
 
   
 0.781
PTH_1749
Uncharacterized protein conserved in bacteria.
  
   
 0.771
SpoIIIAA
Uncharacterized protein conserved in bacteria.
  
  
 0.735
PTH_2908
Containing DUF1256, Protein of unknown function (DUF1256).
  
     0.731
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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