STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1241Uncharacterized conserved protein. (154 aa)    
Predicted Functional Partners:
PTH_1240
Hypothetical membrane protein.
 
    0.916
PTH_0185
Hypothetical membrane protein.
  
     0.759
PTH_1021
Hypothetical protein.
  
   
 0.757
PTH_2800
Hypothetical protein.
  
  
 0.748
PTH_1749
Uncharacterized protein conserved in bacteria.
  
    0.733
PTH_1170
Hypothetical membrane protein.
  
     0.730
PTH_1838
Hypothetical membrane protein; Containing Spore_GerAC domain (pfam05504).
  
     0.723
PTH_2760
Uncharacterized conserved protein.
  
  
 0.717
PTH_1844
Uncharacterized conserved protein.
  
  
 0.715
PTH_1202
Predicted membrane-associated Zn-dependent protease 1.
  
    0.706
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.