STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1282Hypothetical protein; Containing partial SppA (COG0616), Periplasmic serine proteases (ClpP class). (328 aa)    
Predicted Functional Partners:
PTH_1153
Hypothetical membrane protein.
  
     0.686
PTH_1102
Hypothetical protein; Containing fibronectin type 3 domain.
  
    0.681
DnaB
Replicative DNA helicase.
 
     0.674
PTH_2193
Hypothetical protein; Containing partial COG5410, Uncharacterized protein conserved in bacteria and partial COG5362, Phage-related terminase.
 
     0.650
DnaG-2
DNA primase; Bacterial type.
  
     0.647
NrdD-2
Oxygen-sensitive ribonucleoside-triphosphate reductase.
  
     0.624
PTH_2197
Hypothetical protein.
  
     0.585
PilO-2
Tfp pilus assembly protein PilO.
  
     0.577
DnaC-2
DNA replication protein.
  
     0.552
PTH_1777
Hypothetical membrane protein.
  
     0.503
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.