STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1306Zn-dependent dipeptidase, microsomal dipeptidase homolog. (326 aa)    
Predicted Functional Partners:
PTH_1307
Predicted metal-dependent phosphoesterases; PHP family.
       0.790
SpoVS
Uncharacterized protein conserved in bacteria.
 
     0.743
rny
Hypothetical protein; Endoribonuclease that initiates mRNA decay.
       0.548
PTH_1308
Aspartate/tyrosine/aromatic aminotransferase.
     
 0.545
PTH_1304
Uncharacterized protein conserved in bacteria.
       0.535
GuaA
GMP synthase - glutamine amidotransferase domain.
 
 
    0.527
PTH_0750
Hypothetical protein; Containing predicted hydrocarbon binding protein (contains V4R domain) resion (COG1719).
  
  
 0.499
cinA
Conjugated protein of two COG1058, predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
       0.483
MmcM
Related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
     
 0.478
PTH_1309
Predicted translation initiation factor 2B subunit; eIF-2B alpha/beta/delta family.
       0.470
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.