Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Acs | PTH_1319 | PTH_1545 | PTH_1319 | Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases. | Hypothetical protein; Containing partial COG3153, predicted acetyltransferase. | 0.421 |
AcuC | PTH_1319 | PTH_0916 | PTH_1319 | Deacetylases; Including yeast histone deacetylase and acetoin utilization protein. | Hypothetical protein; Containing partial COG3153, predicted acetyltransferase. | 0.478 |
AcuC | PTH_2126 | PTH_0916 | PTH_2126 | Deacetylases; Including yeast histone deacetylase and acetoin utilization protein. | FOG: CBS domain. | 0.454 |
AcuC-2 | PTH_1319 | PTH_1341 | PTH_1319 | Deacetylases; Including yeast histone deacetylase and acetoin utilization protein. | Hypothetical protein; Containing partial COG3153, predicted acetyltransferase. | 0.478 |
AcuC-2 | PTH_2126 | PTH_1341 | PTH_2126 | Deacetylases; Including yeast histone deacetylase and acetoin utilization protein. | FOG: CBS domain. | 0.454 |
AcuC-3 | PTH_1319 | PTH_2033 | PTH_1319 | Deacetylases; Including yeast histone deacetylase and acetoin utilization protein. | Hypothetical protein; Containing partial COG3153, predicted acetyltransferase. | 0.548 |
AcuC-3 | PTH_2126 | PTH_2033 | PTH_2126 | Deacetylases; Including yeast histone deacetylase and acetoin utilization protein. | FOG: CBS domain. | 0.454 |
PTH_1319 | Acs | PTH_1319 | PTH_1545 | Hypothetical protein; Containing partial COG3153, predicted acetyltransferase. | Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases. | 0.421 |
PTH_1319 | AcuC | PTH_1319 | PTH_0916 | Hypothetical protein; Containing partial COG3153, predicted acetyltransferase. | Deacetylases; Including yeast histone deacetylase and acetoin utilization protein. | 0.478 |
PTH_1319 | AcuC-2 | PTH_1319 | PTH_1341 | Hypothetical protein; Containing partial COG3153, predicted acetyltransferase. | Deacetylases; Including yeast histone deacetylase and acetoin utilization protein. | 0.478 |
PTH_1319 | AcuC-3 | PTH_1319 | PTH_2033 | Hypothetical protein; Containing partial COG3153, predicted acetyltransferase. | Deacetylases; Including yeast histone deacetylase and acetoin utilization protein. | 0.548 |
PTH_1319 | PTH_2126 | PTH_1319 | PTH_2126 | Hypothetical protein; Containing partial COG3153, predicted acetyltransferase. | FOG: CBS domain. | 0.635 |
PTH_1319 | PTH_2725 | PTH_1319 | PTH_2725 | Hypothetical protein; Containing partial COG3153, predicted acetyltransferase. | Hypothetical membrane protein. | 0.687 |
PTH_1319 | PspA | PTH_1319 | PTH_1320 | Hypothetical protein; Containing partial COG3153, predicted acetyltransferase. | Suppresse phage shock protein A; (IM30), sigma54-dependent transcription. | 0.475 |
PTH_2126 | AcuC | PTH_2126 | PTH_0916 | FOG: CBS domain. | Deacetylases; Including yeast histone deacetylase and acetoin utilization protein. | 0.454 |
PTH_2126 | AcuC-2 | PTH_2126 | PTH_1341 | FOG: CBS domain. | Deacetylases; Including yeast histone deacetylase and acetoin utilization protein. | 0.454 |
PTH_2126 | AcuC-3 | PTH_2126 | PTH_2033 | FOG: CBS domain. | Deacetylases; Including yeast histone deacetylase and acetoin utilization protein. | 0.454 |
PTH_2126 | PTH_1319 | PTH_2126 | PTH_1319 | FOG: CBS domain. | Hypothetical protein; Containing partial COG3153, predicted acetyltransferase. | 0.635 |
PTH_2725 | PTH_1319 | PTH_2725 | PTH_1319 | Hypothetical membrane protein. | Hypothetical protein; Containing partial COG3153, predicted acetyltransferase. | 0.687 |
PspA | PTH_1319 | PTH_1320 | PTH_1319 | Suppresse phage shock protein A; (IM30), sigma54-dependent transcription. | Hypothetical protein; Containing partial COG3153, predicted acetyltransferase. | 0.475 |