Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MmcD1 | MmcD2 | PTH_1358 | PTH_1359 | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | succinyl-CoA synthetase, alpha subunit. | 0.999 |
| MmcD1 | MmcD2-2 | PTH_1358 | PTH_1360 | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | succinyl-CoA synthetase, alpha subunit. | 0.999 |
| MmcD1 | MmcE | PTH_1358 | PTH_1361 | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | methylmalonyl-CoA mutase, N-terminal domain/subunit. | 0.973 |
| MmcD1 | MmcF | PTH_1358 | PTH_1362 | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | methylmalonyl-CoA mutase, C-terminal domain/subunit; Cobalamin-binding. | 0.969 |
| MmcD1 | MmcG | PTH_1358 | PTH_1363 | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | methylmalonyl-CoA epimerase; Lactoylglutathione lyase and related lyases. | 0.674 |
| MmcD1 | MmcH | PTH_1358 | PTH_1364 | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). | 0.701 |
| MmcD1 | MmcI | PTH_1358 | PTH_1365 | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | methylmalonyl-CoA decarboxylase, epsilon subunit; Hypothetical membrane protein. | 0.603 |
| MmcD1 | MmcJ | PTH_1358 | PTH_1366 | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | methylmalonyl-CoA decarboxylase, gamma subunit; acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.657 |
| MmcD1 | MmcK | PTH_1358 | PTH_1367 | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.866 |
| MmcD1 | MmcL | PTH_1358 | PTH_1368 | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | Transcarboxylase, 5S subunit; Pyruvate/oxaloacetate carboxyltransferase. | 0.636 |
| MmcD2 | MmcD1 | PTH_1359 | PTH_1358 | succinyl-CoA synthetase, alpha subunit. | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.999 |
| MmcD2 | MmcD2-2 | PTH_1359 | PTH_1360 | succinyl-CoA synthetase, alpha subunit. | succinyl-CoA synthetase, alpha subunit. | 0.991 |
| MmcD2 | MmcE | PTH_1359 | PTH_1361 | succinyl-CoA synthetase, alpha subunit. | methylmalonyl-CoA mutase, N-terminal domain/subunit. | 0.978 |
| MmcD2 | MmcF | PTH_1359 | PTH_1362 | succinyl-CoA synthetase, alpha subunit. | methylmalonyl-CoA mutase, C-terminal domain/subunit; Cobalamin-binding. | 0.976 |
| MmcD2 | MmcG | PTH_1359 | PTH_1363 | succinyl-CoA synthetase, alpha subunit. | methylmalonyl-CoA epimerase; Lactoylglutathione lyase and related lyases. | 0.584 |
| MmcD2 | MmcH | PTH_1359 | PTH_1364 | succinyl-CoA synthetase, alpha subunit. | acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). | 0.736 |
| MmcD2 | MmcI | PTH_1359 | PTH_1365 | succinyl-CoA synthetase, alpha subunit. | methylmalonyl-CoA decarboxylase, epsilon subunit; Hypothetical membrane protein. | 0.636 |
| MmcD2 | MmcJ | PTH_1359 | PTH_1366 | succinyl-CoA synthetase, alpha subunit. | methylmalonyl-CoA decarboxylase, gamma subunit; acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.659 |
| MmcD2 | MmcK | PTH_1359 | PTH_1367 | succinyl-CoA synthetase, alpha subunit. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.742 |
| MmcD2 | MmcL | PTH_1359 | PTH_1368 | succinyl-CoA synthetase, alpha subunit. | Transcarboxylase, 5S subunit; Pyruvate/oxaloacetate carboxyltransferase. | 0.662 |
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