STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MmcKMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (312 aa)    
Predicted Functional Partners:
MmcB
Fumarase, N-terminal domain; Fumarate hydratase (COG1951), TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain.
  
 
 0.975
MmcM
Related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
  
  
 0.970
MmcC
Fumarase, C-terminal domain; Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain.
  
 
 0.964
PTH_1174
Hypothetical protein; Containing COG5016 and COG0511 domains.
    
 0.957
PckA
Phosphoenolpyruvate carboxykinase; ATP; Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
  
 
 0.956
SfcA
Malic enzyme.
  
 0.948
MmcE
methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.924
PTH_1421
Aspartate/tyrosine/aromatic aminotransferase.
  
 0.922
PTH_1798
Aspartate/tyrosine/aromatic aminotransferase.
  
 0.922
GltB-2
Glutamate synthase domain 2.
  
 
 0.917
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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