STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AraJ-4Arabinose efflux permease. (401 aa)    
Predicted Functional Partners:
PTH_1815
Hypothetical membrane protein.
 
    0.835
PTH_1816
Uncharacterized conserved protein.
 
     0.763
PTH_1817
Predicted membrane protein.
 
     0.694
PTH_2655
Hypothetical protein.
  
     0.642
PTH_1668
Hypothetical membrane protein.
 
     0.626
PTH_1298
Hypothetical membrane protein.
  
     0.572
PTH_1372
Hypothetical protein.
       0.572
PTH_2025
Hypothetical protein.
  
    0.496
PTH_1749
Uncharacterized protein conserved in bacteria.
  
     0.468
PTH_0188
Hypothetical membrane protein.
  
     0.436
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.