STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZnuCABC-type Mn/Zn transport systems, ATPase component. (246 aa)    
Predicted Functional Partners:
ZnuB
ABC-type Mn2+/Zn2+ transport systems, permease components.
 0.999
LraI
ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.999
PTH_2802
Hypothetical protein; Containing partial CcmA (COG1131), ABC-type multidrug transport system, ATPase component.
 
   
0.914
PTH_1514
ABC-type multidrug transport system, permease component.
 
    0.903
PTH_1477
Uncharacterized conserved protein.
 
      0.899
CbiQ
ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
    
 0.860
Fur-2
Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
  
  
 0.843
LivM
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.747
LivH-3
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.573
SalY-2
ABC-type antimicrobial peptide transport system, permease component.
 
    0.557
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.