STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XerD-5Site-specific recombinase XerD; Belongs to the 'phage' integrase family. (317 aa)    
Predicted Functional Partners:
PTH_0213
Hypothetical protein; Containing partial XerD (COG4974), site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.620
PTH_1432
Hypothetical protein; Containing partial XerD (COG4974), site-specific recombinase XerD.
  
     0.620
PTH_2451
Hypothetical integrase; Containing partial XerD (COG4974), site-specific recombinase XerD.
  
     0.620
XerC-2
Integrase; Belongs to the 'phage' integrase family.
  
     0.606
XerC-5
Integrase.
  
     0.606
XerD-7
Site-specific recombinase.
  
     0.606
Apt
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
    0.483
ComFC
Predicted amidophosphoribosyltransferases.
   
    0.412
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.