Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTH_1406Hypothetical protein; Containing COG1150, HdrC, heterodisulfide reductase, subunit C. (346 aa)    
Predicted Functional Partners:
UbiB-2
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
   
 0.994
FlpD
Methyl-viologen-reducing hydrogenase, delta subunit.
 
 
 0.919
HdrA
Heterodisulfide reductase, subunit A and related polyferredoxins.
 
 
 0.913
FrhD
Coenzyme F420-reducing hydrogenase, delta subunit.
 
 
 0.880
HdrB
Heterodisulfide reductase, subunit B.
 
 
 0.880
RnfC
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC.
 
 
0.859
HdrA-2
Heterodisulfide reductase, subunit A and related polyferredoxins.
 
 
 0.856
GlpC
Fe-S oxidoreductase.
 
     0.854
PTH_2234
Uncharacterized conserved protein; Containing a ferredoxin-like domain.
  
 
 0.737
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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