STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GlpCFe-S oxidoreductase. (193 aa)    
Predicted Functional Partners:
HdrB
Heterodisulfide reductase, subunit B.
 0.999
HdrA
Heterodisulfide reductase, subunit A and related polyferredoxins.
 
 0.996
FrhD
Coenzyme F420-reducing hydrogenase, delta subunit.
 
 0.995
RnfC
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC.
 
  0.990
HdrA-2
Heterodisulfide reductase, subunit A and related polyferredoxins.
 
 
 0.949
PTH_1406
Hypothetical protein; Containing COG1150, HdrC, heterodisulfide reductase, subunit C.
 
     0.855
UbiB-2
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
   
 0.835
FlpD
Methyl-viologen-reducing hydrogenase, delta subunit.
 
 
 0.834
PTH_2234
Uncharacterized conserved protein; Containing a ferredoxin-like domain.
  
 
 0.744
PTH_0445
Hypothetical membrane protein; Containing NapF, ferredoxin (COG1145).
 
 
 0.445
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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