STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1424Hypothetical membrane protein; Containing partial COG3315, O-methyltransferase involved in polyketide biosynthesis. (312 aa)    
Predicted Functional Partners:
PTH_1775
Hypothetical signaling protein; Containing predicted kinase (COG4639) and calcineurin-like phosphoesterase domain.
   
   0.849
WcaJ-2
Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.591
PTH_1120
Hypothetical protein; Containing two Glycos_transf_2, Glycosyl transferase domain, TPR, Tetratricopeptide repeat domain and partial COG1216, predicted glycosyltransferases.
  
  
 0.582
PTH_2583
Hypothetical protein; Containing partial NrfG (COG0457), FOG: TPR repeat.
 
    0.549
PTH_0142
Hypothetical protein; Containing predicted ATPase (COG3899), FhlA, FOG: GAF domain (COG2203), S_TKc, serine/threonine protein kinases, catalytic domain, His Kinase A (phosphoacceptor), HATPase_c, Histidine kinase-like ATPase, REC, signal receiver domain, and ArcB, FOG: HPt domain (COG2198).
   
 
 0.540
AmiC-3
N-acetylmuramoyl-L-alanine amidase.
       0.527
PTH_1873
Hypothetical protein.
  
   
 0.515
PheA
Prephenate dehydratase.
     
 0.503
PTH_1282
Hypothetical protein; Containing partial SppA (COG0616), Periplasmic serine proteases (ClpP class).
  
    0.490
PTH_1153
Hypothetical membrane protein.
  
     0.483
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.