Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TadCFlp pilus assembly protein TadC. (323 aa)    
Predicted Functional Partners:
CitB-4
Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.999
CpaB
Flp pilus assembly protein CpaB.
 
 
 0.998
VirB11
Type IV secretory pathway, VirB11 components, and related ATPase; Involved in archaeal flagella biosynthesis.
 
 
 0.998
TadC-2
Flp pilus assembly protein TadC.
 
 
0.998
PulO-2
Prepilin peptidase CpaA; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases, prepilin signal peptidase PulO and related peptidases.
 
  
 0.963
TadG
Flp pilus assembly protein TadG.
 
  
 0.963
TadD
Flp pilus assembly protein TadD; Contains TPR repeats.
 
  
 0.952
PTH_1454
Uncharacterized conserved protein.
 
     0.937
Flp
Flp pilus assembly protein, pilin Flp, pilin Flp.
 
  
 0.895
Tar-2
Methyl-accepting chemotaxis protein.
  
    0.620
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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