STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TadC-2Flp pilus assembly protein TadC. (307 aa)    
Predicted Functional Partners:
TadC
Flp pilus assembly protein TadC.
 
  
0.991
CpaB
Flp pilus assembly protein CpaB.
 
  
 0.985
VirB11
Type IV secretory pathway, VirB11 components, and related ATPase; Involved in archaeal flagella biosynthesis.
 
  
 0.982
CitB-4
Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  
 0.980
TadG
Flp pilus assembly protein TadG.
 
    0.951
PTH_1454
Uncharacterized conserved protein.
 
     0.945
TadD
Flp pilus assembly protein TadD; Contains TPR repeats.
 
    0.939
PulO-2
Prepilin peptidase CpaA; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases, prepilin signal peptidase PulO and related peptidases.
 
   
 0.916
Flp
Flp pilus assembly protein, pilin Flp, pilin Flp.
 
  
 0.875
Tar-2
Methyl-accepting chemotaxis protein.
       0.638
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.