STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CbiQ-3ABC-type cobalt transport system, permease component CbiQ and related transporters. (309 aa)    
Predicted Functional Partners:
CbiO-4
ABC-type cobalt transport system, ATPase component.
 
 
 0.965
CbiO-6
ABC-type cobalt transport system, ATPase component.
 
 0.964
PTH_0256
Hypothetical membrane protein; Containing BioY uncharacterized conserved protein (COG1268).
 
 0.961
PTH_1478
Predicted membrane protein.
 
 
 0.961
CbiO-2
ABC-type cobalt transport system, ATPase component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 0.959
CbiO-7
ABC-type cobalt transport system, ATPase component.
 
 0.954
CbiO
ABC-type cobalt transport system, ATPase component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 0.953
CbiQ
ABC-type cobalt transport system, permease component CbiQ and related transporters.
  
  
  0.939
CbiQ-5
ABC-type cobalt transport system, permease component CbiQ and related transporters.
  
  
 
0.916
PTH_1481
Hypothetical protein; Containing ISOPREN_C2_like domain contains class II terpene cyclases, protein prenyltransferases beta subunit.
 
     0.893
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.