Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1483Hypothetical membrane protein; Containing ISOPREN_C2_like domain and SLH, S-layer homology domain. (1174 aa)    
Predicted Functional Partners:
CbiQ-3
ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
    0.835
PTH_2790
Hypothetical protein.
 
  
 0.728
PTH_2788
Hypothetical protein.
  
    0.723
PTH_0168
Hypothetical membrane protein.
 
 
 
 0.722
PTH_0764
Hypothetical membrane protein.
 
   
 0.721
PTH_1478
Predicted membrane protein.
 
     0.698
PTH_2778
Hypothetical protein; Containing partial WcaK (COG2327), uncharacterized conserved protein.
  
     0.673
PTH_1481
Hypothetical protein; Containing ISOPREN_C2_like domain contains class II terpene cyclases, protein prenyltransferases beta subunit.
 
   
0.658
FtsK
DNA segregation ATPase FtsK/SpoIIIE and related proteins.
   
 
 0.626
PTH_0475
Hypothetical protein.
  
    0.619
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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