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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FrhBCoenzyme F420-reducing hydrogenase, beta subunit. (404 aa)    
Predicted Functional Partners:
DsrA
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
    
 0.898
HyaB
Ni,Fe-hydrogenase I large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 
 0.832
AraJ-3
Arabinose efflux permease.
  
    0.757
CitB-2
Response regulator; Citrate/malate metabolism.
 
     0.736
PTH_1711
Hypothetical formate dehydrogenase; Containing partial COG3383, Uncharacterized anaerobic dehydrogenase.
  
 
 0.736
PrpD
Uncharacterized protein; Involved in propionate catabolism.
 
     0.735
GltB-2
Glutamate synthase domain 2.
  
 
 0.729
HdrA
Heterodisulfide reductase, subunit A and related polyferredoxins.
  
 
 0.699
HdrA-2
Heterodisulfide reductase, subunit A and related polyferredoxins.
  
 
 0.699
SdhB-2
Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.
 
     0.641
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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