STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1501Hypothetical protein. (72 aa)    
Predicted Functional Partners:
XdhA
Xanthine dehydrogenase, iron-sulfur clusterand FAD-binding subunit A.
 
 
 0.925
CoxM
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 
 
 0.921
CoxS-2
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 
 
 0.834
CoxS
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 
 
 0.832
PTH_0679
Aerobic-type carbon monoxide dehydrogenase; Containing COG1229 CoxL and COG2080 CoxS.
 
 
0.775
ArsR-7
Predicted transcriptional regulator.
       0.524
PTH_1502
Hypothetical protein.
       0.508
PTH_1503
Hypothetical protein.
       0.473
PTH_1499
Predicted integral membrane protein.
       0.460
XdhC-2
Xanthine and CO dehydrogenases maturation factor; XdhC/CoxF family.
 
  
 0.441
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.