STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1502Hypothetical protein. (113 aa)    
Predicted Functional Partners:
GltB-2
Glutamate synthase domain 2.
  
 
 0.999
UbiB
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
 
 0.985
NuoF-3
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
 
 
 0.956
NuoF
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
 
 
 0.940
NuoF-2
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
 
 
 0.922
UbiB-3
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
  
 
 0.784
GltD
NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
     0.761
HdrA-2
Heterodisulfide reductase, subunit A and related polyferredoxins.
 
      0.743
GltB
Glutamate synthase domain 2.
  
 
 0.729
PTH_0947
Hypothetical protein.
  
 
 0.729
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.