STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XdhC-2Xanthine and CO dehydrogenases maturation factor; XdhC/CoxF family. (380 aa)    
Predicted Functional Partners:
PTH_1534
Hypothetical protein.
   
 0.975
PTH_1532
Uncharacterized MobA-related protein.
  
 0.947
CoxM
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 
  
 0.903
PTH_1533
Hypothetical protein.
 
  
 0.901
XdhA
Xanthine dehydrogenase, iron-sulfur clusterand FAD-binding subunit A.
 
  
 0.877
PTH_1549
Hypothetical protein.
   
 0.866
CoxS
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 
  
 0.857
CoxL
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
 
  
 0.856
CoxS-2
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 
  
 0.817
CoxL-2
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
 
  
 0.813
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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