Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FixB-3Electron transfer flavoprotein, alpha subunit. (330 aa)    
Predicted Functional Partners:
FixA-2
Electron transfer flavoprotein, beta subunit.
 0.995
FixA-4
Electron transfer flavoprotein, beta subunit.
 0.989
FixA
Electron transfer flavoprotein, beta subunit.
 0.967
FixA-3
Electron transfer flavoprotein, beta subunit.
 0.967
Etf
Electron transfer flavoprotein; ETF.
 0.966
FixA-5
Electron transfer flavoprotein, beta subunit.
 
 0.943
PTH_0600
Hypothetical protein; Containing partial FixA (COG2086), electron transfer flavoprotein, beta subunit.
 
 0.931
CaiA
acyl-CoA dehydrogenases.
 
 0.890
CaiA-2
acyl-CoA dehydrogenases.
 
 0.890
CaiA-7
acyl-CoA dehydrogenases.
 
 0.890
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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