STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GlpC-2Fe-S oxidoreductase. (649 aa)    
Predicted Functional Partners:
PTH_2234
Uncharacterized conserved protein; Containing a ferredoxin-like domain.
 
 
0.939
FixA-2
Electron transfer flavoprotein, beta subunit.
  
 0.876
MmcM
Related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
  
  
 0.776
FixB-3
Electron transfer flavoprotein, alpha subunit.
 
  
 0.751
PTH_2806
Hypothetical transcriptional regulator; Containing effector domain of the CAP family of transcription factors, Sigma-54 interaction domain and partial NapH (COG0348), Polyferredoxin.
  
  
 0.703
RnfC
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC.
  
 
 0.702
PTH_2235
Uncharacterized conserved protein.
 
 
 0.702
DsrC
Dissimilatory sulfite reductase (desulfoviridin), gamma subunit.
   
 
 0.641
PTH_0680
Hypothetical protein; Containing GlpC (COG0247), Fe-S oxidoreductase and partial GltD (COG0493), NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 
 0.620
GlpC-4
Fe-S oxidoreductase.
 
 
 0.612
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.