Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RfaG-12Glycosyltransferase. (404 aa)    
Predicted Functional Partners:
GlgB
1,4-alpha-glucan branching enzyme.
 
 0.980
OtsB
Trehalose-6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 0.956
OtsA
Trehalose-6-phosphate synthase.
  
 0.938
GalU-2
UDP-glucose pyrophosphorylase.
    
 0.904
PTH_1587
Hypothetical protein; Containing partial Alpha-amylase/alpha-mannosidase (COG1449).
 
    0.694
TreY
Maltooligosyl trehalose synthase.
 
   
 0.688
MalQ
4-alpha-glucanotransferase.
 
   
 0.593
WcaJ-2
Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.484
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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