STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1639Hypothetical protein. (221 aa)    
Predicted Functional Partners:
PTH_2701
Hypothetical protein.
 
 
 0.900
PTH_0721
Hypothetical protein.
  
 
 0.829
SpmB
Uncharacterized membrane protein.
       0.682
SpmA
Uncharacterized membrane protein; Required for spore maturation.
       0.682
PTH_2702
Hypothetical protein.
 
     0.650
PTH_2455
Uncharacterized conserved protein.
 
 
   0.639
PTH_0862
Hypothetical protein.
  
  
 0.573
PTH_0140
Hypothetical protein.
 
    0.539
PTH_0725
Hypothetical protein; Containing HipB (COG1396), predicted transcriptional regulator and COG2856, predicted Zn peptidase.
 
    0.532
PTH_1990
Uncharacterized protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.
  
 
 0.521
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.