STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1644Uncharacterized conserved protein; Belongs to the UPF0229 family. (382 aa)    
Predicted Functional Partners:
PrkA
Putative Ser protein kinase.
  
 0.997
SpoVR
Uncharacterized conserved protein.
 
  
 0.993
PTH_2159
Hypothetical protein; Containing partial PhoH (COG1702), phosphate starvation-inducible protein PhoH, predicted ATPase.
   
    0.485
PTH_1642
Hypothetical membrane protein; Containing GIDA domain.
       0.468
PTH_1646
Hypothetical membrane protein.
  
    0.460
PTH_2655
Hypothetical protein.
  
     0.453
PTH_0095
Hypothetical protein; Containing partial ErfK (COG1376), Uncharacterized protein conserved in bacteria and partial LytE (COG1388), FOG: LysM repeat.
   
    0.445
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.