Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PrkAPutative Ser protein kinase. (631 aa)    
Predicted Functional Partners:
PTH_1644
Uncharacterized conserved protein; Belongs to the UPF0229 family.
  
 0.997
SpoVR
Uncharacterized conserved protein.
 
  
 0.994
GlgA
Glycogen synthase.
   
    0.623
PTH_1605
Hypothetical protein; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
   
  
 0.613
OtsA
Trehalose-6-phosphate synthase.
   
    0.570
OtsB
Trehalose-6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.561
PTH_0095
Hypothetical protein; Containing partial ErfK (COG1376), Uncharacterized protein conserved in bacteria and partial LytE (COG1388), FOG: LysM repeat.
   
  
 0.538
PTH_2655
Hypothetical protein.
  
     0.525
PTH_2159
Hypothetical protein; Containing partial PhoH (COG1702), phosphate starvation-inducible protein PhoH, predicted ATPase.
   
  
 0.464
PTH_1642
Hypothetical membrane protein; Containing GIDA domain.
       0.462
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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